Translation initiation events on structured eukaryotic mRNAs generate gene expression noise
E. Dacheux, N. Malys, X. Meng, V. Ramachandran, P. Mendes, J. E. G. McCarthy
Nucleic Acids Research
May 17, 2017
Design of an embedded inverse-feedforward biomolecular tracking controller for enzymatic reaction processes
M. Foo, J. Kim, R. Sawlekar, D. G. Bates
Computers & Chemical Engineering
January 17, 2017
Engineering orthogonal dual transcription factors for multi-input synthetic promoters
A. K. Brödel, A. Jaramillo, M. Isalan
Nature Communications
December 16, 2016
Minimum-noise production of translation factor eIF4G maps to a mechanistically determined optimal rate control window for protein synthesis
X. Meng, H. Firczuk, P. Pietroni, R. Westbrook, E. Dacheux, P. Mendes, J. E. G. McCarthy
Nucleic Acids Research
December 07, 2016
Exploiting the dynamic properties of covalent modification cycle for the design of synthetic analog biomolecular circuitry
M. Foo, R. Sawlekar, D. G. Bates
Journal of Biological Engineering
November 14, 2016
Modeling Enzyme Processivity Reveals that RNA-Seq Libraries Are Biased in Characteristic and Correctable Ways
N. Archer, M. D. Walsh, V. Shahrezaei, D. Hebenstreit
Cell Systems
November 10, 2016
Biologically inspired design of feedback control systems implemented using DNA strand displacement reactions
M. Foo, R. Sawlekar, V. V. Kulkarni, D. G. Bates
38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society
October 18, 2016
Predicting the Dynamics and Heterogeneity of Genomic DNA Content within Bacterial Populations across Variable Growth Regimes
M. du Lac, A. H. Scarpelli, A. K. D. Younger, D. G. Bates, J. N. Leonard
ACS Synthetic Biology
September 30, 2016
Discrete-time L1 adaptive controller to regulate in vivo protein expressions
V. V. Kulkarni, F. Islam
QSP-UK 1st Exchange Workshop
September 05, 2016
Ultrasensitive Negative Feedback Control: A Natural Approach for the Design of Synthetic Controllers
F. Montefusco, O. E. Akman, O. S. Soyer, D. G. Bates
PLoS One
August 18, 2016
Host-aware modelling of a synthetic genetic oscillator
A. Darlington, D. G. Bates
38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society
August 08, 2016
Parasitic plants—A CuRe for what ails thee
V. Ntoukakis, S. Gimenez-Ibanez
July 29, 2016
WISB: Warwick Integrative Synthetic Biology Centre
J. McCarthy
Biochemical Society Transactions
June 09, 2016
Mechanistic Modeling of a Rewritable Recombinase Addressable Data Module
J. Bowyer, J. Zhao, P. Subsoontorn, W. Wong, S. Rosser, D. G. Bates
IEEE Transactions on Biomedical Circuits and Systems
May 24, 2016
Implementing Nonlinear Feedback Controllers Using DNA Strand Displacement Reactions
R. Sawlekar, F. Montefusco, V. V. Kulkarni, D. G. Bates
IEEE Transactions on NanoBioscience
April 29, 2016
Nonlinear Dynamics in Gene Regulation Promote Robustness and Evolvability of Gene Expression Levels
A. Steinacher, D. G. Bates, O. E. Akman, O. S. Soyer
April 15, 2016
Microbial diversity arising from thermodynamic constraints
T. Großkopf, O. S Soyer
The ISME Journal
April 01, 2016
Using RNA as Molecular Code for Programming Cellular Function
M. Kushwaha, W. Rostain, S. Prakash, J. N. Duncan, A. Jaramillo
ACS Synthetic Biology
March 21, 2016
Genetically modified bacteriophages
A. P. Sagona, A. M. Grigonyte, P. R. MacDonald, A. Jaramillo
Integrative Biology
February 15, 2016
Plant root-microbe communication in shaping root microbiomes
A. Lareen, F. Burton, P. Schäfer
Plant Molecular Biology
January 04, 2016
Functionalization of an Antisense Small RNA
G. Rodrigo, S. Prakash, T. Cordero, M. Kushwaha, A. Jaramillo
Journal of Molecular Biology
January 04, 2016
Biomolecular Implementation of a Quasi Sliding Mode Feedback Controller based on DNA Strand Displacement Reactions
R. Sawlekar, F. Montefusco, V. V. Kulkarni, D. G. Bates
Proceedings of the 37th IEEE Engineering in Medicine and Biology Conference
December 01, 2015
Ion channels enable electrical communication in bacterial communities
A. Prindle, J. Liu, M. Asally, J. Garcia-Ojalvo, G. M. Süel
October 21, 2015
Unique post-translational oxime formation in the biosynthesis of the azolemycin complex of novel ribosomal peptides from Streptomyces sp. FXJ1.264
N. Liu, L. Song, M. Liu, F. Shang, Z. Anderson, D. J. Fox, G. L. Challis, Y. Huang
Chemical Science
October 06, 2015
Exploring the Dynamics and Mutational Landscape of Riboregulation with a Minimal Synthetic Circuit in Living Cells
G. Rodrigo, E. Majer, S. Prakash, J. Daròs, A. Jaramillo, J. F. Poyatos
Biophysical Journal
September 01, 2015
Constraint-Based Genetic Compilation
C. Ladroue, S. Kalvala
Lecture Notes in Bioinformatics
August 05, 2015
Metabolic co-dependence gives rise to collective oscillations within biofilms
J. Liu, A. Prindle, J. Humphries, M. Gabalda-Sagarra, M. Asally, D. D. Lee, S. Ly, J. Garcia-Ojalvo, G. M. Süel
July 22, 2015
Growth versus immunity — a redirection of the cell cycle?
R. Eichmann, P. Schäfer
Current Opinion in Plant Biology
July 17, 2015
Standards for plant synthetic biology: a common syntax for exchange of DNA parts
N. J. Patron, D. Orzaez, S. Marillonnet, H. Warzecha, C. Matthewman, M. Youles, O. Raitskin, A. Leveau, G. Farré, C. Rogers, A. Smith, J. Hibberd, A. A. R. Webb, J. Locke, S. Schornack, J. Ajioka, D. C. Baulcombe, C. Zipfel, S. Kamoun, J. D. G. Jones, H. Kuhn, S. Robatzek, H. Peter Van Esse, D. Sanders, G. Oldroyd, C. Martin, R. Field, S. O'Connor, S. Fox, B. Wulff, B. Miller, A. Breakspear, G. Radhakrishnan, P. Delaux, D. Loqué, A. Granell, A. Tissier, P. Shih, T. P. Brutnell, W. Paul Quick, H. Rischer, P. D. Fraser, A. Aharoni, C. Raines, P. F. South, J. Ané, B. R. Hamberger, J. Langdale, J. Stougaard, H. Bouwmeester, M. Udvardi, J. A. H. Murray, V. Ntoukakis, P. Schäfer, K. Denby, K. J. Edwards, A. Osbourn, J. Haseloff
New Phytologist
July 14, 2015
Discovery of microbial natural products by activation of silent biosynthetic gene clusters
P. J. Rutledge, G. L. Challis
Nature Reviews Microbiology
June 29, 2015
Dynamic signal processing by ribozyme-mediated RNA circuits to control gene expression
S. Shen, G. Rodrigo, S. Prakash, E. Majer, T. E. Landrain, B. Kirov, J. Daròs, A. Jaramillo
Nucleic Acids Research
April 27, 2015

WISB has been funded by the above bodies